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  5. HORVU5Hr1G069180.3

HORVU5Hr1G069180.3


Description : regulatory factor *(RBP45/47) of mRNA stress granule formation


Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G069180.3
Cluster HCAA Clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
100454 No alias RNA-binding protein 47C\' 0.02 Orthogroups_2024-Update
At3g19130 No alias Polyadenylate-binding protein RBP47B... 0.06 Orthogroups_2024-Update
Bradi1g73030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Bradi3g46470 No alias RNA-binding protein 47C 0.05 Orthogroups_2024-Update
Bradi4g32380 No alias RNA-binding protein 47C 0.07 Orthogroups_2024-Update
Brara.A02894.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.04 Orthogroups_2024-Update
PSME_00014443-RA No alias (at5g19350 : 396.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00049035-RA No alias (at5g54900 : 346.0) RNA-binding protein 45A (RBP45A);... 0.03 Orthogroups_2024-Update
Seita.6G037200.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.02 Orthogroups_2024-Update
Solyc11g065880 No alias RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC) 0.02 Orthogroups_2024-Update
Sopen04g032920 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 202 266
IPR000504 RRM_dom 109 175
IPR000504 RRM_dom 304 367
No external refs found!