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  5. HORVU5Hr1G069690.1

HORVU5Hr1G069690.1


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G069690.1
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Bradi2g37327 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.19G234100 No alias histone H2A 7 0.03 Orthogroups_2024-Update
HORVU0Hr1G013190.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
HORVU6Hr1G021250.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU7Hr1G100100.3 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU7Hr1G100110.4 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
LOC_Os05g02300 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
MA_94328g0020 No alias (p35063|h2ax_picab : 194.0) Histone H2AX - Picea abies... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 127 160
IPR007125 Histone_H2A/H2B/H3 30 124
No external refs found!