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  5. HORVU5Hr1G069990.3

HORVU5Hr1G069990.3


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G069990.3
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_15530 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
Bradi3g51600 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G057789 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Kfl00212_0070 kfl00212_0070_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g005320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Solyc11g007530 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DVK5_THECC) 0.03 Orthogroups_2024-Update
Sopen01g002900 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen12g024180 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_606.5 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 42 85
No external refs found!