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  5. At3g16050

At3g16050


Description : Pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR6]


Gene families : OG_42_0002804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g16050
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Kfl00325_0080 kfl00325_0080_v1.1 (q9at63|pdx1_ginbi : 466.0) Pyridoxin biosynthesis... 0.03 Orthogroups_2024-Update
Mp2g20880.1 No alias synthase component of pyridoxal 5-phosphate synthase complex 0.02 Orthogroups_2024-Update
PSME_00011509-RA No alias (q9at63|pdx1_ginbi : 345.0) Pyridoxin biosynthesis... 0.05 Orthogroups_2024-Update
Pp1s240_28V6 No alias pyridoxine biosynthesis protein 0.03 Orthogroups_2024-Update
Pp1s350_40V6 No alias pyridoxine biosynthesis protein 0.02 Orthogroups_2024-Update
Pp1s54_52V6 No alias pyridoxine biosynthesis protein 0.02 Orthogroups_2024-Update
Seita.J005500.1 No alias synthase component of pyridoxal 5-phosphate synthase complex 0.03 Orthogroups_2024-Update
evm.model.tig00000254.47 No alias (q9at63|pdx1_ginbi : 396.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 31 232
No external refs found!