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  5. At3g16350

At3g16350


Description : At3g16350 [Source:UniProtKB/TrEMBL;Acc:Q84TG2]


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g16350
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
A4A49_23978 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
At5g47390 No alias Transcription factor KUA1... 0.03 Orthogroups_2024-Update
Bradi2g05590 No alias myb-like transcription factor family protein 0.04 Orthogroups_2024-Update
Bradi3g14830 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi3g33440 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.B03763.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Brara.C01919.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.E02518.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.E02946.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.06 Orthogroups_2024-Update
Brara.F00380.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.G02453.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G290100 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G019400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G073300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
HORVU3Hr1G019840.4 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
HORVU3Hr1G052710.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
HORVU3Hr1G085140.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os06g07660 No alias myb-like DNA-binding domain, SHAQKYF class family... 0.02 Orthogroups_2024-Update
LOC_Os10g41260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_6326342g0010 No alias (at5g08520 : 120.0) Duplicated homeodomain-like... 0.03 Orthogroups_2024-Update
PSME_00026612-RA No alias (at5g47390 : 221.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
PSME_00054865-RA No alias (at5g08520 : 214.0) Duplicated homeodomain-like... 0.02 Orthogroups_2024-Update
Potri.005G087700 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s66_87V6 No alias dna binding 0.03 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Sobic.001G295600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G034300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G034800.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.003G211200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc04g005100 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen04g001120 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g033680 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g028480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 138 182
No external refs found!