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  5. HORVU5Hr1G079050.1

HORVU5Hr1G079050.1


Description : Unknown function


Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G079050.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G264500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g32090 No alias PPR repeat domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_499258g0010 No alias (at1g71060 : 380.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Seita.2G131400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G082000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 496 525
IPR002885 Pentatricopeptide_repeat 215 243
IPR002885 Pentatricopeptide_repeat 453 486
IPR002885 Pentatricopeptide_repeat 389 435
IPR002885 Pentatricopeptide_repeat 251 293
IPR002885 Pentatricopeptide_repeat 317 364
No external refs found!