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  5. HORVU5Hr1G079090.7

HORVU5Hr1G079090.7


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G079090.7
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
101239 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
108652 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_32855 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
At2g34400 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 Orthogroups_2024-Update
At2g41080 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.05 Orthogroups_2024-Update
At3g05240 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At3g15130 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At3g25060 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
At4g25270 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.03 Orthogroups_2024-Update
At4g30700 No alias MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] 0.03 Orthogroups_2024-Update
At4g33170 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Orthogroups_2024-Update
Bradi1g03670 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g53450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g29450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g14000 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Orthogroups_2024-Update
Brara.E00818.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G01460.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.H01279.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00794.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00527.1 No alias RNA editing factor *(MEF29) 0.03 Orthogroups_2024-Update
GRMZM2G076257 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G096602 No alias pentatricopeptide (PPR) repeat-containing protein 0.06 Orthogroups_2024-Update
GRMZM2G099875 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143377 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G320723 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G079500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.07G068800 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G289802 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G236700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G102800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G023470.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G093220.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G053030.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G061610.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os04g14130 No alias pentatricopeptide, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os04g21910 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g02200 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g39090 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os10g39460 No alias selenium-binding protein-like, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os12g01850 No alias pentatricopeptide, putative, expressed 0.07 Orthogroups_2024-Update
MA_168311g0010 No alias (at4g02750 : 377.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_79624g0010 No alias (at3g25970 : 531.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00005325-RA No alias (at3g13770 : 417.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00034399-RA No alias (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00054324-RA No alias (at3g24000 : 542.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00057046-RA No alias (at4g18750 : 592.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Potri.006G001200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G001000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G124400.1 No alias RNA editing factor *(OTP81) 0.04 Orthogroups_2024-Update
Seita.7G277600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G403500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G197400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g049810 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc01g110010 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc02g093380 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g114660 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g017290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g064750 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g039430 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen01g052200 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen03g038830 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen06g022100 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen09g001850 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen11g026910 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen12g021390 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 371
IPR002885 Pentatricopeptide_repeat 110 132
IPR002885 Pentatricopeptide_repeat 169 216
IPR002885 Pentatricopeptide_repeat 272 319
No external refs found!