1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU5Hr1G081190.1

HORVU5Hr1G081190.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004045_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G081190.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
111647 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
At2g21320 No alias B-box zinc finger protein 18... 0.06 Orthogroups_2024-Update
At4g38960 No alias B-box type zinc finger family protein... 0.06 Orthogroups_2024-Update
Bradi4g35950 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Brara.F03890.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G143718 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.01G168500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
LOC_Os09g35880 No alias B-box zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G162600 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s207_121V6 No alias F3K23.8; zinc finger (B-box type) family protein... 0.02 Orthogroups_2024-Update
Seita.2G284200.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G273300.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Solyc01g110370 No alias Zinc finger, B-box (AHRD V3.3 *** A0A118K2C5_CYNCS) 0.04 Orthogroups_2024-Update
Solyc02g084420 No alias B-box zinc finger family protein (AHRD V3.3 *** AT2G21320.1) 0.03 Orthogroups_2024-Update
Sopen01g052520 No alias B-box zinc finger 0.04 Orthogroups_2024-Update
Sopen02g029130 No alias B-box zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 116 155
No external refs found!