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  5. HORVU5Hr1G082830.1

HORVU5Hr1G082830.1


Description : Unknown function


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G082830.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_42691 No alias ring-h2 finger protein atl7 0.02 Orthogroups_2024-Update
At2g42350 No alias RING-H2 finger protein ATL40... 0.03 Orthogroups_2024-Update
At2g42360 No alias E3 ubiquitin-protein ligase ATL41... 0.03 Orthogroups_2024-Update
At3g14320 No alias Putative RING-H2 finger protein ATL61... 0.04 Orthogroups_2024-Update
Brara.A02910.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.D02177.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E01533.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G03437.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G475521 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G028310.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G081290.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G080840.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU5Hr1G016710.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU5Hr1G087860.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G022590.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU7Hr1G036370.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Kfl00066_0030 kfl00066_0030_v1.1 (at1g23980 : 83.2) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
LOC_Os01g61470 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g48310 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g39260 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g45060 No alias RING-H2 finger protein ATL2M, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g16060 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g38110 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g24530 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00051567-RA No alias (at3g16720 : 108.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
Potri.005G071300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G064400 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.010G243300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.002G416300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G036400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G056600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc04g082690 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.02 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 129 173
No external refs found!