HORVU5Hr1G086960.7

Description : RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP complex

Gene families : OG_42_0008323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008323_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU5Hr1G086960.7
Cluster	HCAA Clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method	Actions
evm.model.tig00000823.31	No alias	(at3g10400 : 157.0) RNA recognition motif and CCHC-type...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	16Dec
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	62	131
IPR001878	Znf_CCHC	156	171

External Links

No external refs found!