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  5. HORVU5Hr1G089190.1

HORVU5Hr1G089190.1


Description : Unknown function


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G089190.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
406315 No alias glycine-rich RNA-binding protein 4 0.04 Orthogroups_2024-Update
A4A49_03158 No alias glycine-rich rna-binding protein 4, mitochondrial 0.02 Orthogroups_2024-Update
At2g21690 No alias Putative glycine-rich RNA binding protein... 0.03 Orthogroups_2024-Update
At4g13850 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 Orthogroups_2024-Update
At5g61030 No alias GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5] 0.02 Orthogroups_2024-Update
Brara.C00156.1 No alias RNA chaperone *(RZ1) 0.02 Orthogroups_2024-Update
Brara.J01355.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01454.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G172300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Glyma.06G263200 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Glyma.11G255000 No alias glycine-rich RNA-binding protein 2 0.02 Orthogroups_2024-Update
Potri.001G409800 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Seita.5G427300.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Sopen05g032250 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update
Sopen07g024600 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen10g032720 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
evm.model.contig_2015.16 No alias (q08937|roc2_nicsy : 89.4) 29 kDa ribonucleoprotein B,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!