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  5. HORVU5Hr1G091920.4

HORVU5Hr1G091920.4


Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G091920.4
Cluster HCAA Clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Brara.B03874.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.04 Orthogroups_2024-Update
GRMZM2G080635 No alias Ca(2)-dependent phospholipid-binding protein (Copine) family 0.02 Orthogroups_2024-Update
GRMZM2G477113 No alias RING domain ligase1 0.02 Orthogroups_2024-Update
Glyma.04G211000 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.05 Orthogroups_2024-Update
Glyma.08G001466 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.03 Orthogroups_2024-Update
Glyma.08G130800 No alias RING domain ligase2 0.03 Orthogroups_2024-Update
Glyma.19G078600 No alias RING domain ligase1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 87 125
IPR010734 Copine 158 336
No external refs found!