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  5. At3g17060

At3g17060


Description : Probable pectinesterase 67 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSP1]


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g17060
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
A4A49_28049 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
Brara.F02821.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.04 Orthogroups_2024-Update
LOC_Os01g44340 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g41650 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g46190 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G120100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.2G137200.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 46 332
No external refs found!