Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU5Hr1G093530.3 | |
Cluster | HCAA Clusters: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g05750 | No alias | Pentatricopeptide repeat-containing protein At1g05750,... | 0.02 | Orthogroups_2024-Update | |
At5g39350 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G020008 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G060337 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G085089 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.12G146900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G111860.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g10740 | No alias | tetratricopeptide-like helical, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00024868-RA | No alias | (at1g11290 : 684.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
Pp1s68_207V6 | No alias | ppr gene for putative pentatricopeptide repeat-like protein PPR | 0.03 | Orthogroups_2024-Update | |
Seita.3G227100.1 | No alias | RNA editing factor *(MEF21) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G007000.2 | No alias | RNA editing factor *(ELI1) | 0.02 | Orthogroups_2024-Update | |
Sobic.009G250700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc04g082870 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g054250 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen03g026730 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen05g007940 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen07g003070 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update | |
Sopen07g017190 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003333 | amino acid transmembrane transport | IEP | Predicted GO |
MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
MF | GO:0004594 | pantothenate kinase activity | IEP | Predicted GO |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
BP | GO:0006865 | amino acid transport | IEP | Predicted GO |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
MF | GO:0008199 | ferric iron binding | IEP | Predicted GO |
BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Predicted GO |
BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
CC | GO:0031082 | BLOC complex | IEP | Predicted GO |
CC | GO:0031083 | BLOC-1 complex | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
CC | GO:0044445 | cytosolic part | IEP | Predicted GO |
BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 368 | 396 |
IPR002885 | Pentatricopeptide_repeat | 405 | 430 |
IPR002885 | Pentatricopeptide_repeat | 168 | 191 |
IPR002885 | Pentatricopeptide_repeat | 302 | 327 |
IPR002885 | Pentatricopeptide_repeat | 230 | 259 |
IPR002885 | Pentatricopeptide_repeat | 198 | 224 |
IPR002885 | Pentatricopeptide_repeat | 334 | 357 |
No external refs found! |