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  5. HORVU5Hr1G105090.1

HORVU5Hr1G105090.1


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G105090.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66370 No alias histone H2A 6 0.04 Orthogroups_2024-Update
Bradi4g06010 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre13.g591150 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Glyma.12G215600 No alias histone H2A 2 0.02 Orthogroups_2024-Update
Glyma.13G333900 No alias histone H2A 12 0.03 Orthogroups_2024-Update
Glyma.19G239200 No alias gamma histone variant H2AX 0.03 Orthogroups_2024-Update
HORVU4Hr1G008800.1 No alias histone *(H2A) 0.05 Orthogroups_2024-Update
HORVU4Hr1G070250.3 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
HORVU4Hr1G090910.2 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
HORVU6Hr1G006120.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU7Hr1G030120.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
HORVU7Hr1G117230.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
LOC_Os03g51200 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.05 Orthogroups_2024-Update
LOC_Os12g25120 No alias core histone H2A/H2B/H3/H4, putative, expressed 0.03 Orthogroups_2024-Update
MA_169054g0020 No alias (p50567|h2a_chlre : 140.0) Histone H2A - Chlamydomonas... 0.03 Orthogroups_2024-Update
MA_3822944g0010 No alias (p50567|h2a_chlre : 97.1) Histone H2A - Chlamydomonas... 0.02 Orthogroups_2024-Update
MA_7320190g0010 No alias (p19177|h2a_petcr : 149.0) Histone H2A - Petroselinum... 0.03 Orthogroups_2024-Update
MA_924620g0010 No alias (q2hu68|h2a1_medtr : 180.0) Probable histone H2A.1 -... 0.04 Orthogroups_2024-Update
PSME_00017670-RA No alias (p35063|h2ax_picab : 188.0) Histone H2AX - Picea abies... 0.02 Orthogroups_2024-Update
Seita.3G347600.1 No alias histone *(H2A) 0.07 Orthogroups_2024-Update
Sobic.002G276000.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Solyc03g005220 No alias calcium-dependent protein kinase 21 (AHRD V3.3 --* AT4G04720.2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 103
IPR032454 Histone_H2A_C 106 138
No external refs found!