HORVU5Hr1G106610.2

Description : linker histone *(H1)

Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU5Hr1G106610.2
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19166	No alias	histone h1	0.02	Orthogroups_2024-Update
Bradi1g55260	No alias	winged-helix DNA-binding transcription factor family protein	0.03	Orthogroups_2024-Update
Bradi5g19000	No alias	histone H1-3	0.04	Orthogroups_2024-Update
GRMZM2G080274	No alias	histone H1-3	0.06	Orthogroups_2024-Update
GRMZM2G121221	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
GRMZM2G401308	No alias	winged-helix DNA-binding transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.10G033100	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.10G163300	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.20G225900	No alias	winged-helix DNA-binding transcription factor family protein	0.03	Orthogroups_2024-Update
MA_500183g0010	No alias	(original description: no original description)	0.05	Orthogroups_2024-Update
MA_5243726g0010	No alias	(p27806\|h1_wheat : 91.3) Histone H1 - Triticum aestivum...	0.06	Orthogroups_2024-Update
MA_6409g0010	No alias	(original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00053828-RA	No alias	(original description: no original description)	0.03	Orthogroups_2024-Update
Sobic.010G021300.2	No alias	linker histone *(H1)	0.03	Orthogroups_2024-Update
Solyc06g084020	No alias	histone H1	0.03	Orthogroups_2024-Update
Solyc09g083380	No alias	Histone H1 (AHRD V3.3 - H1_MAIZE)	0.03	Orthogroups_2024-Update
Sopen06g035400	No alias	linker histone H1 and H5 family	0.02	Orthogroups_2024-Update
Sopen09g032300	No alias	linker histone H1 and H5 family	0.04	Orthogroups_2024-Update
evm.model.contig_2062.24	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008238	exopeptidase activity	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	80	148

External Links

No external refs found!

HORVU5Hr1G106610.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation