Description : linker histone *(H1)
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU5Hr1G106610.2 | |
Cluster | HCAA Clusters: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_19166 | No alias | histone h1 | 0.02 | Orthogroups_2024-Update | |
Bradi1g55260 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g19000 | No alias | histone H1-3 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G080274 | No alias | histone H1-3 | 0.06 | Orthogroups_2024-Update | |
GRMZM2G121221 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G401308 | No alias | winged-helix DNA-binding transcription factor family protein | 0.05 | Orthogroups_2024-Update | |
Glyma.10G033100 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.10G163300 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G225900 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
MA_500183g0010 | No alias | (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
MA_5243726g0010 | No alias | (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... | 0.06 | Orthogroups_2024-Update | |
MA_6409g0010 | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00053828-RA | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G021300.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
Solyc06g084020 | No alias | histone H1 | 0.03 | Orthogroups_2024-Update | |
Solyc09g083380 | No alias | Histone H1 (AHRD V3.3 *-* H1_MAIZE) | 0.03 | Orthogroups_2024-Update | |
Sopen06g035400 | No alias | linker histone H1 and H5 family | 0.02 | Orthogroups_2024-Update | |
Sopen09g032300 | No alias | linker histone H1 and H5 family | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2062.24 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | 16Dec |
MF | GO:0003677 | DNA binding | IEA | 16Dec |
BP | GO:0006334 | nucleosome assembly | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
BP | GO:0008037 | cell recognition | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0022414 | reproductive process | IEP | Predicted GO |
BP | GO:0048544 | recognition of pollen | IEP | Predicted GO |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 80 | 148 |
No external refs found! |