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  5. HORVU5Hr1G106730.2

HORVU5Hr1G106730.2


Description : linker histone *(H1)


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G106730.2
Cluster HCAA Clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Bradi1g55260 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi5g19000 No alias histone H1-3 0.04 Orthogroups_2024-Update
Brara.E01274.1 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
GRMZM2G080274 No alias histone H1-3 0.04 Orthogroups_2024-Update
GRMZM2G121221 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G401308 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.10G033100 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.10G163300 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G094390.5 No alias linker histone *(H1) 0.04 Orthogroups_2024-Update
MA_500183g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.06 Orthogroups_2024-Update
MA_6409g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00053828-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.005G219800 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
Sobic.010G021300.2 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
Solyc06g084020 No alias histone H1 0.03 Orthogroups_2024-Update
Solyc09g083380 No alias Histone H1 (AHRD V3.3 *-* H1_MAIZE) 0.04 Orthogroups_2024-Update
Sopen09g032300 No alias linker histone H1 and H5 family 0.04 Orthogroups_2024-Update
evm.model.contig_2062.24 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA 16Dec
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006334 nucleosome assembly IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 88 155
No external refs found!