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  5. HORVU5Hr1G109880.2

HORVU5Hr1G109880.2


Description : Unknown function


Gene families : OG_42_0000355 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G109880.2
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
At2g34510 No alias Uncharacterized protein At2g34510... 0.04 Orthogroups_2024-Update
Brara.E03158.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.06G070900 No alias Protein of unknown function, DUF642 0.03 Orthogroups_2024-Update
Glyma.09G228000 No alias Protein of unknown function, DUF642 0.02 Orthogroups_2024-Update
PSME_00019733-RA No alias (at5g11420 : 473.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
PSME_00024031-RA No alias (at5g25460 : 494.0) Protein of unknown function, DUF642;... 0.04 Orthogroups_2024-Update
Potri.001G174400 No alias Protein of unknown function, DUF642 0.02 Orthogroups_2024-Update
Potri.001G263900 No alias Protein of unknown function, DUF642 0.04 Orthogroups_2024-Update
Potri.003G059800 No alias Protein of unknown function, DUF642 0.03 Orthogroups_2024-Update
Potri.006G250100 No alias Protein of unknown function, DUF642 0.02 Orthogroups_2024-Update
Potri.009G058800 No alias Protein of unknown function, DUF642 0.04 Orthogroups_2024-Update
Potri.018G031100 No alias Protein of unknown function, DUF642 0.02 Orthogroups_2024-Update
Sopen02g019630 No alias Protein of unknown function (DUF642) 0.02 Orthogroups_2024-Update
Sopen04g007700 No alias Protein of unknown function (DUF642) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006946 DUF642 77 234
IPR006946 DUF642 245 412
No external refs found!