1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU5Hr1G110330.1

HORVU5Hr1G110330.1


Description : beta-type-5 component *(PBE) of 26S proteasome


Gene families : OG_42_0004202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G110330.1
Cluster HCAA Clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cre10.g461950 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 Orthogroups_2024-Update
LOC_Os06g06030 No alias peptidase, T1 family, putative, expressed 0.02 Orthogroups_2024-Update
Potri.010G058100 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 Orthogroups_2024-Update
Seita.4G070600.1 No alias beta-type-5 component *(PBE) of 26S proteasome 0.03 Orthogroups_2024-Update
Sobic.010G042800.1 No alias beta-type-5 component *(PBE) of 26S proteasome 0.03 Orthogroups_2024-Update
Sopen05g034570 No alias Proteasome subunit 0.03 Orthogroups_2024-Update
evm.model.tig00020554.44 No alias (o24361|psb5_spiol : 306.0) Proteasome subunit beta type... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA 16Dec
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 58 239
No external refs found!