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  5. HORVU5Hr1G110470.1

HORVU5Hr1G110470.1


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G110470.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_18078 No alias developmental protein sepallata 1 0.05 Orthogroups_2024-Update
A4A49_20590 No alias mads-box transcription factor 27 0.02 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_23145 No alias mads-box protein soc1 0.03 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.03 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.06 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.03 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.02 Orthogroups_2024-Update
At2g34440 No alias AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29] 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.06 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi2g59191 No alias AGAMOUS-like 19 0.05 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02103.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
GRMZM2G026223 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.02G287700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.04 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.04 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G080900 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G054390.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g06860 No alias OsMADS80 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
PSME_00017434-RA No alias (at4g11880 : 100.0) AGL12, AGL14, and AGL17 are all... 0.03 Orthogroups_2024-Update
PSME_00017701-RA No alias (at4g16370 : 263.0) Encodes an oligopeptide transporter... 0.03 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Potri.001G328600 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Potri.007G115000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.009G084200 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.012G132600 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Potri.012G133000 No alias AGAMOUS-like 42 0.03 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Pp1s267_56V6 No alias agamous-like protein 0.02 Orthogroups_2024-Update
Seita.4G177800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G142500.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
Solyc01g060300 No alias damaged DNA binding 2 (AHRD V3.3 --* AT5G58760.2) 0.04 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.03 Orthogroups_2024-Update
Solyc06g059970 No alias TPI 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 102 144
No external refs found!