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  5. HORVU5Hr1G110680.1

HORVU5Hr1G110680.1


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G110680.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66360 No alias histone H2A 6 0.04 Orthogroups_2024-Update
Brara.J01356.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Mp3g02370.1 No alias histone (H2A) 0.02 Orthogroups_2024-Update
Solyc01g099410 No alias Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g074300 No alias Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g073250 No alias Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) 0.04 Orthogroups_2024-Update
Solyc11g073260 No alias Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) 0.02 Orthogroups_2024-Update
Solyc12g005270 No alias Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 90 122
IPR007125 Histone_H2A/H2B/H3 10 86
No external refs found!