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  5. HORVU5Hr1G113040.5

HORVU5Hr1G113040.5


Description : clade D phosphatase


Gene families : OG_42_0000281 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G113040.5
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G108309 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
GRMZM2G479665 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
PSME_00047698-RA No alias (at4g33920 : 473.0) Protein phosphatase 2C family... 0.02 Orthogroups_2024-Update
Solyc01g107310 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g049630 No alias Protein phosphatase 2C family protein (AHRD V3.3 *** AT4G33920.1) 0.02 Orthogroups_2024-Update
Solyc10g078820 No alias Phosphatase 2C family protein (AHRD V3.3 *** A0A061F4N6_THECC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 954 1230
IPR002182 NB-ARC 105 331
No external refs found!