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  5. HORVU5Hr1G113580.5

HORVU5Hr1G113580.5


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G113580.5
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_64370 No alias expansin-a1 0.03 Orthogroups_2024-Update
At3g55500 No alias Expansin-A16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S9] 0.03 Orthogroups_2024-Update
Brara.F03107.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.K01453.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Glyma.14G221500 No alias expansin 11 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.02 Orthogroups_2024-Update
Pp1s75_138V6 No alias alpha-expansin 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 70 158
IPR007117 Expansin_CBD 169 246
No external refs found!