1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU5Hr1G114400.2

HORVU5Hr1G114400.2


Description : component *(NRPB1) of RNA polymerase II complex


Gene families : OG_42_0001434 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G114400.2

Target Alias Description ECC score Gene Family Method Actions
A4A49_44191 No alias dna-directed rna polymerase iii subunit 1 0.01 Orthogroups_2024-Update
Brara.H01626.1 No alias component *(NRPB1) of RNA polymerase II complex 0.02 Orthogroups_2024-Update
HORVU2Hr1G126750.3 No alias component *(NRPB1) of RNA polymerase II complex 0.02 Orthogroups_2024-Update
Potri.001G341900 No alias nuclear RNA polymerase C1 0.02 Orthogroups_2024-Update
Seita.8G135500.1 No alias component *(NRPB1) of RNA polymerase II complex 0.04 Orthogroups_2024-Update
Sobic.007G044100.1 No alias component *(NRPB1) of RNA polymerase II complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA 16Dec
BP GO:0006351 transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 356 524
IPR007075 RNA_pol_Rpb1_6 898 1082
IPR007066 RNA_pol_Rpb1_3 528 694
IPR007081 RNA_pol_Rpb1_5 832 1421
IPR007073 RNA_pol_Rpb1_7 1167 1296
IPR007083 RNA_pol_Rpb1_4 721 825
IPR007080 RNA_pol_Rpb1_1 14 354
No external refs found!