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  5. HORVU5Hr1G119250.2

HORVU5Hr1G119250.2


Description : RNA editing factor *(OTP72)


Gene families : OG_42_0014364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0014364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G119250.2
Cluster HCAA Clusters: Cluster_189


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 336 356
IPR002885 Pentatricopeptide_repeat 24 49
IPR002885 Pentatricopeptide_repeat 229 251
IPR002885 Pentatricopeptide_repeat 156 184
IPR002885 Pentatricopeptide_repeat 127 152
IPR002885 Pentatricopeptide_repeat 465 495
IPR032867 DYW_dom 697 771
IPR002885 Pentatricopeptide_repeat 362 409
No external refs found!