HORVU5Hr1G120250.1

Description : component *(uS6c) of small plastid ribosomal-subunit proteome

Gene families : OG_42_0007385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU5Hr1G120250.1
Cluster	HCAA Clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
58368	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.05	Orthogroups_2024-Update
A4A49_03704	No alias	30s ribosomal protein s6 alpha, chloroplastic	0.09	Orthogroups_2024-Update
A4A49_12743	No alias	30s ribosomal protein s6 alpha, chloroplastic	0.05	Orthogroups_2024-Update
Bradi1g02030	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.15	Orthogroups_2024-Update
Brara.I01293.1	No alias	component *(uS6c) of small plastid ribosomal-subunit proteome	0.18	Orthogroups_2024-Update
Brara.I01316.1	No alias	component *(uS6c) of small plastid ribosomal-subunit proteome	0.12	Orthogroups_2024-Update
Cre12.g520600	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.15	Orthogroups_2024-Update
GRMZM2G118005	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.07	Orthogroups_2024-Update
Glyma.05G218800	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.12	Orthogroups_2024-Update
Glyma.08G024900	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.07	Orthogroups_2024-Update
Kfl00077_0230	kfl00077_0230_v1.1	(p82403\|rr6_spiol : 125.0) 30S ribosomal protein S6...	0.1	Orthogroups_2024-Update
LOC_Os03g62630	No alias	ribosomal protein S6, putative, expressed	0.04	Orthogroups_2024-Update
MA_10429326g0010	No alias	(at1g64510 : 179.0) Translation elongation factor...	0.03	Orthogroups_2024-Update
Potri.001G088300	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.09	Orthogroups_2024-Update
Pp1s24_129V6	No alias	ribosomal protein s6	0.03	Orthogroups_2024-Update
Pp1s359_29V6	No alias	ribosomal protein s6	0.04	Orthogroups_2024-Update
Seita.9G016600.1	No alias	component *(uS6c) of small plastid ribosomal-subunit proteome	0.15	Orthogroups_2024-Update
Sobic.001G017000.1	No alias	component *(uS6c) of small plastid ribosomal-subunit proteome	0.06	Orthogroups_2024-Update
Solyc08g082690	No alias	Ribosomal protein S6 (AHRD V3.3 *** A0A103XFW4_CYNCS)	0.1	Orthogroups_2024-Update
Sopen08g030910	No alias	Ribosomal protein S6	0.17	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	99	198

External Links

No external refs found!

HORVU5Hr1G120250.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation