1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU5Hr1G120410.1

HORVU5Hr1G120410.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G120410.1
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
103099 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
96927 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
At1g05750 No alias Pentatricopeptide repeat-containing protein At1g05750,... 0.02 Orthogroups_2024-Update
Bradi3g50980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G168378 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM5G862936 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G082860.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g06880 No alias EMB2758, putative, expressed 0.03 Orthogroups_2024-Update
Seita.5G065900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G341000.1 No alias RNA editing factor *(MEF25) 0.03 Orthogroups_2024-Update
Sobic.002G065200.1 No alias RNA editing factor *(CRR28) 0.03 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G030100.1 No alias RNA editing factor *(CWM1) 0.03 Orthogroups_2024-Update
Sopen04g022860 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen12g032340 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 58 105
IPR002885 Pentatricopeptide_repeat 161 209
IPR002885 Pentatricopeptide_repeat 463 508
IPR002885 Pentatricopeptide_repeat 262 310
IPR002885 Pentatricopeptide_repeat 361 409
No external refs found!