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  5. HORVU5Hr1G124580.1

HORVU5Hr1G124580.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G124580.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AC214534.3_FG010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 Orthogroups_2024-Update
At1g15510 No alias Pentatricopeptide repeat-containing protein At1g15510,... 0.01 Orthogroups_2024-Update
At2g03380 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.02 Orthogroups_2024-Update
Bradi2g57140 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.A02032.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E00200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E01751.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G057130.1 No alias Unknown function 0.01 Orthogroups_2024-Update
PSME_00016965-RA No alias (at1g11290 : 683.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Pp1s446_7V6 No alias F18A5.40; pentatricopeptide (PPR) repeat-containing... 0.03 Orthogroups_2024-Update
Sobic.001G058400.1 No alias RNA editing factor *(OTP85) 0.03 Orthogroups_2024-Update
Sobic.009G079400.1 No alias RNA editing factor *(ECD1) 0.01 Orthogroups_2024-Update
Solyc01g010510 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.01 Orthogroups_2024-Update
Solyc10g080220 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Sopen01g015270 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen02g019790 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen06g022100 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen06g024560 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 266
IPR002885 Pentatricopeptide_repeat 116 163
IPR002885 Pentatricopeptide_repeat 529 577
IPR002885 Pentatricopeptide_repeat 324 372
IPR002885 Pentatricopeptide_repeat 431 459
IPR002885 Pentatricopeptide_repeat 504 528
No external refs found!