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  5. HORVU5Hr1G125650.13

HORVU5Hr1G125650.13


Description : component *(LUG/LUH) of transcriptional co-repressor complex


Gene families : OG_42_0000674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000674_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G125650.13
Cluster HCAA Clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Bradi2g43077 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.03 Orthogroups_2024-Update
Glyma.10G102400 No alias LEUNIG_homolog 0.02 Orthogroups_2024-Update
MA_65863g0010 No alias (at2g32700 : 119.0) Encodes a WD40 repeat and LUFS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006594 LisH 68 94
IPR001680 WD40_repeat 828 861
IPR001680 WD40_repeat 620 650
IPR001680 WD40_repeat 658 693
IPR001680 WD40_repeat 581 608
IPR001680 WD40_repeat 747 778
No external refs found!