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  5. HORVU6Hr1G002090.1

HORVU6Hr1G002090.1


Description : Unknown function


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G002090.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_04775 No alias putative e3 ubiquitin ligase sud1 0.03 Orthogroups_2024-Update
LOC_Os03g53550 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g34230 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g24850 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc10g052420 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g010380 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen01g024920 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen01g030720 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen03g021380 No alias Reverse transcriptase-like 0.03 Orthogroups_2024-Update
Sopen05g019690 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen08g011500 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g005990 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen10g015950 No alias hypothetical protein 0.03 Orthogroups_2024-Update
evm.model.tig00000836.34 No alias (atmg00860 : 90.9) hypothetical protein; DNA/RNA... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!