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  5. HORVU6Hr1G002270.1

HORVU6Hr1G002270.1


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G002270.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
79393 No alias AGAMOUS-like 67 0.02 Orthogroups_2024-Update
A4A49_18078 No alias developmental protein sepallata 1 0.06 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
A4A49_28929 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.03 Orthogroups_2024-Update
At1g69120 No alias AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846] 0.02 Orthogroups_2024-Update
At5g20240 No alias Floral homeotic protein PISTILLATA... 0.02 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.09 Orthogroups_2024-Update
Bradi3g32090 No alias AGAMOUS-like 20 0.06 Orthogroups_2024-Update
Brara.C00925.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.05 Orthogroups_2024-Update
Brara.D00288.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02757.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03965.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G026223 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.04 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.03 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.15G088600 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU1Hr1G008300.3 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
MA_101463g0010 No alias (q9xj60|mad50_orysa : 102.0) MADS-box transcription... 0.02 Orthogroups_2024-Update
MA_95674g0010 No alias (at2g45660 : 104.0) Controls flowering and is required... 0.02 Orthogroups_2024-Update
PSME_00036249-RA No alias (at4g11880 : 99.8) AGL12, AGL14, and AGL17 are all... 0.02 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Potri.001G328600 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.005G150501 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
Potri.019G077200 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Pp1s163_73V6 No alias mikc* mads-box transcription factor 0.03 Orthogroups_2024-Update
Pp1s267_56V6 No alias agamous-like protein 0.04 Orthogroups_2024-Update
Seita.1G308200.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
Seita.3G073000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G561000.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G086500.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Solyc01g060300 No alias damaged DNA binding 2 (AHRD V3.3 --* AT5G58760.2) 0.04 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.02 Orthogroups_2024-Update
Solyc01g106170 No alias AGAMOUS-like MADS-box transcription factor (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g067230 No alias MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA) 0.05 Orthogroups_2024-Update
Sopen02g034000 No alias K-box region 0.04 Orthogroups_2024-Update
Sopen07g029280 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!