1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU6Hr1G005010.1

HORVU6Hr1G005010.1


Description : histone demethylase *(KDM3)


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G005010.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
A4A49_14273 No alias lysine-specific demethylase jmj25 0.02 Orthogroups_2024-Update
At1g62310 No alias Transcription factor jumonji (JmjC) domain-containing... 0.02 Orthogroups_2024-Update
At4g00990 No alias Transcription factor jumonji (JmjC) domain-containing... 0.04 Orthogroups_2024-Update
Bradi3g01060 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.06 Orthogroups_2024-Update
Bradi4g19168 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
Brara.H02846.1 No alias histone demethylase *(KDM3) & auxiliary component... 0.04 Orthogroups_2024-Update
GRMZM2G383210 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.13G247400 No alias Zinc finger, RING-type;Transcription factor... 0.04 Orthogroups_2024-Update
PSME_00027154-RA No alias (at4g00990 : 676.0) Transcription factor jumonji (jmjC)... 0.03 Orthogroups_2024-Update
Pp1s444_19V6 No alias jmjc domain containing expressed 0.02 Orthogroups_2024-Update
Seita.1G005800.1 No alias histone demethylase *(KDM3) 0.03 Orthogroups_2024-Update
Sopen02g023610 No alias WRC 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 609 711
No external refs found!