HORVU6Hr1G005390.1

Description : component *(eL37) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G005390.1
Cluster	HCAA Clusters: Cluster_168

Target	Alias	Description	ECC score	Gene Family Method
At1g15250	No alias	60S ribosomal protein L37-1...	0.06	Orthogroups_2024-Update
At3g16080	No alias	60S ribosomal protein L37-3...	0.05	Orthogroups_2024-Update
Bradi3g01190	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Bradi3g55170	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Brara.C03600.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Brara.E01589.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.F00200.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Brara.H00172.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Cre10.g430400	No alias	Zinc-binding ribosomal protein family protein	0.07	Orthogroups_2024-Update
GRMZM2G168674	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Glyma.08G205500	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Glyma.13G357900	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Kfl00864_0030	kfl00864_0030_v1.1	(at3g16080 : 136.0) Zinc-binding ribosomal protein...	0.03	Orthogroups_2024-Update
PSME_00050791-RA	No alias	(at3g16080 : 155.0) Zinc-binding ribosomal protein...	0.08	Orthogroups_2024-Update
Potri.006G243300	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Potri.018G036900	No alias	Zinc-binding ribosomal protein family protein	0.08	Orthogroups_2024-Update
Pp1s152_133V6	No alias	60s ribosomal protein l37	0.08	Orthogroups_2024-Update
Pp1s222_87V6	No alias	60s ribosomal protein l37	0.08	Orthogroups_2024-Update
Pp1s3_512V6	No alias	60s ribosomal protein l37	0.08	Orthogroups_2024-Update
Pp1s475_18V6	No alias	60s ribosomal protein l37	0.12	Orthogroups_2024-Update
Seita.1G363500.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Sobic.001G347901.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.16	Orthogroups_2024-Update
Sobic.004G008400.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Solyc03g120780	No alias	Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC)	0.07	Orthogroups_2024-Update
Solyc06g066660	No alias	Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU)	0.06	Orthogroups_2024-Update
Solyc08g068180	No alias	Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC)	0.04	Orthogroups_2024-Update
Sopen03g039600	No alias	Ribosomal protein L37e	0.11	Orthogroups_2024-Update
Sopen06g024930	No alias	Ribosomal protein L37e	0.13	Orthogroups_2024-Update
evm.model.tig00020610.80	No alias	(at1g52300 : 115.0) Zinc-binding ribosomal protein...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000228	nuclear chromosome	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004017	adenylate kinase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006338	chromatin remodeling	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Predicted GO
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
BP	GO:0030488	tRNA methylation	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
BP	GO:0032259	methylation	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
CC	GO:0034708	methyltransferase complex	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
CC	GO:0043527	tRNA methyltransferase complex	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
BP	GO:0045048	protein insertion into ER membrane	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Predicted GO
BP	GO:0051205	protein insertion into membrane	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0071816	tail-anchored membrane protein insertion into ER membrane	IEP	Predicted GO
BP	GO:0072657	protein localization to membrane	IEP	Predicted GO
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001569	Ribosomal_L37e	2	53

External Links

No external refs found!

HORVU6Hr1G005390.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation