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  5. HORVU6Hr1G006130.6

HORVU6Hr1G006130.6


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G006130.6
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66370 No alias histone H2A 6 0.03 Orthogroups_2024-Update
MA_427046g0010 No alias (q84nj4|h2a3_orysa : 144.0) Probable histone H2A.3 -... 0.03 Orthogroups_2024-Update
PSME_00034361-RA No alias (q94e96|h2a5_orysa : 194.0) Probable histone H2A.5 -... 0.03 Orthogroups_2024-Update
Potri.006G082300 No alias histone H2A 12 0.04 Orthogroups_2024-Update
evm.model.tig00001085.4 No alias (p16866|h2a4_volca : 154.0) Histone H2A-IV - Volvox... 0.03 Orthogroups_2024-Update
evm.model.tig00001525.8 No alias (p16866|h2a4_volca : 177.0) Histone H2A-IV - Volvox... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 90 121
IPR007125 Histone_H2A/H2B/H3 10 86
No external refs found!