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  5. HORVU6Hr1G009020.1

HORVU6Hr1G009020.1


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G009020.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_56752 No alias putative histone h2a.1 0.01 Orthogroups_2024-Update
Bradi4g06010 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Brara.F02852.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.J00931.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU4Hr1G058940.2 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
HORVU6Hr1G011490.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G021160.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU7Hr1G030120.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU7Hr1G112470.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
MA_22203g0020 No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.02 Orthogroups_2024-Update
PSME_00000143-RA No alias (q84nj4|h2a3_orysa : 176.0) Probable histone H2A.3 -... 0.01 Orthogroups_2024-Update
Potri.006G082300 No alias histone H2A 12 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 93
IPR032454 Histone_H2A_C 97 129
No external refs found!