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  5. HORVU6Hr1G010870.1

HORVU6Hr1G010870.1


Description : Unknown function


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G010870.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
At4g37950 No alias Rhamnogalacturonate lyase family protein... 0.02 Orthogroups_2024-Update
Brara.A01448.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G026250.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.006G253601 No alias Rhamnogalacturonate lyase family protein 0.02 Orthogroups_2024-Update
Seita.8G129700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g076650 No alias Rhamnogalacturonate lyase family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 1 86
IPR029413 RG-lyase_II 247 319
IPR029411 RG-lyase_III 334 524
No external refs found!