1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU6Hr1G011490.2

HORVU6Hr1G011490.2


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G011490.2
Cluster HCAA Clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
A4A49_30810 No alias histone h2ax 0.03 Orthogroups_2024-Update
Bradi1g25390 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Bradi1g66360 No alias histone H2A 6 0.03 Orthogroups_2024-Update
Brara.F02852.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Cre06.g265350 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre06.g268050 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre06.g273900 No alias histone H2A 10 0.03 Orthogroups_2024-Update
Cre06.g275850 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre12.g504750 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre17.g711700 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre17.g713400 No alias histone H2A 10 0.02 Orthogroups_2024-Update
GRMZM2G041381 No alias histone H2A 2 0.03 Orthogroups_2024-Update
GRMZM2G109448 No alias histone H2A 12 0.03 Orthogroups_2024-Update
GRMZM2G151726 No alias histone H2A 2 0.04 Orthogroups_2024-Update
GRMZM2G151826 No alias histone H2A 2 0.04 Orthogroups_2024-Update
Glyma.03G148100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G241800 No alias gamma histone variant H2AX 0.05 Orthogroups_2024-Update
Glyma.13G286000 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Glyma.13G333900 No alias histone H2A 12 0.04 Orthogroups_2024-Update
Glyma.13G334300 No alias histone H2A 12 0.07 Orthogroups_2024-Update
Glyma.15G040200 No alias histone H2A 12 0.04 Orthogroups_2024-Update
Glyma.15G040300 No alias histone H2A 12 0.04 Orthogroups_2024-Update
Glyma.19G151400 No alias gamma histone variant H2AX 0.05 Orthogroups_2024-Update
Glyma.19G234100 No alias histone H2A 7 0.04 Orthogroups_2024-Update
HORVU4Hr1G008800.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU4Hr1G070250.3 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU5Hr1G026650.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G009020.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G021160.1 No alias histone *(H2A) 0.07 Orthogroups_2024-Update
LOC_Os05g02300 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.04 Orthogroups_2024-Update
MA_7320190g0010 No alias (p19177|h2a_petcr : 149.0) Histone H2A - Petroselinum... 0.02 Orthogroups_2024-Update
Mp4g21750.1 No alias histone (H2A) 0.02 Orthogroups_2024-Update
PSME_00000143-RA No alias (q84nj4|h2a3_orysa : 176.0) Probable histone H2A.3 -... 0.02 Orthogroups_2024-Update
PSME_00008210-RA No alias (at1g54690 : 107.0) Encodes HTA3, a histone H2A protein.... 0.05 Orthogroups_2024-Update
Potri.005G040700 No alias gamma histone variant H2AX 0.02 Orthogroups_2024-Update
Potri.006G082300 No alias histone H2A 12 0.03 Orthogroups_2024-Update
Pp1s55_112V6 No alias histone 2 0.03 Orthogroups_2024-Update
Pp1s72_86V6 No alias histone h2a 0.02 Orthogroups_2024-Update
Solyc01g099410 No alias Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g074300 No alias Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g082710 No alias Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC) 0.02 Orthogroups_2024-Update
Solyc10g006560 No alias Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH) 0.03 Orthogroups_2024-Update
Solyc11g073250 No alias Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) 0.02 Orthogroups_2024-Update
Solyc12g005270 No alias Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g001250 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 24 102
IPR032454 Histone_H2A_C 106 137
No external refs found!