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  5. HORVU6Hr1G014170.8

HORVU6Hr1G014170.8


Description : CORVET-specific component *(VPS8) of HOPS/CORVET membrane tethering complexes


Gene families : OG_42_0005340 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G014170.8
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
441252 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Bradi3g02497 No alias transducin family protein / WD-40 repeat family protein 0.05 Orthogroups_2024-Update
Glyma.16G018400 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
MA_10432728g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00026331-RA No alias (at4g00800 : 395.0) transducin family protein / WD-40... 0.03 Orthogroups_2024-Update
Pp1s193_48V6 No alias vacuolar protein sorting 8 homolog 0.02 Orthogroups_2024-Update
Seita.1G103100.1 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 496 549
IPR025941 Vps8_central_dom 974 1158
No external refs found!