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  5. HORVU6Hr1G015480.1

HORVU6Hr1G015480.1


Description : substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G015480.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_04030 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
A4A49_15233 No alias btbpoz domain-containing protein 0.04 Orthogroups_2024-Update
A4A49_24985 No alias root phototropism protein 2 0.04 Orthogroups_2024-Update
At2g23050 No alias BTB/POZ domain-containing protein NPY4... 0.04 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.03 Orthogroups_2024-Update
At5g67440 No alias BTB/POZ domain-containing protein NPY3... 0.03 Orthogroups_2024-Update
Bradi1g09246 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi1g70761 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Brara.A00595.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Brara.C01564.1 No alias phototropin signalling factor *(RPT2) 0.03 Orthogroups_2024-Update
Brara.D01374.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.02 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.11G049800 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.11G200201 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.13G140800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G221200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.14G102500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G161500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G163500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G023260.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G046340.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
LOC_Os03g52880 No alias BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
MA_15614g0010 No alias (at1g67900 : 556.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00000012-RA No alias (at2g30520 : 298.0) light inducible root phototropism 2... 0.04 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.006G264300 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Seita.9G099400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G120000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G029700.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 249 560
No external refs found!