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  5. HORVU6Hr1G016120.11

HORVU6Hr1G016120.11


Description : E3 ubiquitin ligase *(SINA)


Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G016120.11
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
A4A49_25816 No alias e3 ubiquitin-protein ligase sinat3 0.03 Orthogroups_2024-Update
Glyma.15G237300 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
HORVU2Hr1G022590.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
Potri.003G198600 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA 16Dec
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
BP GO:0007275 multicellular organism development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 105 304
No external refs found!