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  5. Solyc03g083360

Solyc03g083360


Description : Pectinesterase (AHRD V3.3 *** K4BIB2_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc03g083360
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
A4A49_30247 No alias putative pectinesterasepectinesterase inhibitor 28 0.02 Orthogroups_2024-Update
At1g11580 No alias methylesterase PCR A [Source:TAIR;Acc:AT1G11580] 0.02 Orthogroups_2024-Update
At3g43270 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.04 Orthogroups_2024-Update
Bradi1g16780 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Bradi2g52140 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Brara.B01456.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I05209.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434002g0010 No alias (at3g49220 : 399.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Seita.5G022500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.6G168400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sopen09g030120 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 67 215
IPR000070 Pectinesterase_cat 269 566
No external refs found!