At3g19390

Description : Probable cysteine protease RD21C [Source:UniProtKB/Swiss-Prot;Acc:Q9LT78]

Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g19390
Cluster	HCCA clusters: Cluster_235

Target	Alias	Description	ECC score	Gene Family Method
At1g29110	No alias	Cysteine proteinases superfamily protein...	0.03	Orthogroups_2024-Update
PSME_00021084-RA	No alias	(at5g43060 : 574.0) Granulin repeat cysteine protease...	0.03	Orthogroups_2024-Update
Pp1s49_32V6	No alias	cysteine protease	0.02	Orthogroups_2024-Update
Solyc01g107760	No alias	Cysteine protease, putative (AHRD V3.3 *** B9RYC1_RICCO)	0.04	Orthogroups_2024-Update
Sopen04g034460	No alias	Papain family cysteine protease	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000118	Granulin	374	420
IPR013201	Prot_inhib_I29	43	100
IPR000668	Peptidase_C1A_C	129	345

External Links

No external refs found!