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  5. At3g19740

At3g19740


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g19740
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_27642 No alias katanin p60 atpase-containing subunit a1 0.04 Orthogroups_2024-Update
Bradi1g18160 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Bradi1g62731 No alias AAA-type ATPase family protein 0.06 Orthogroups_2024-Update
Glyma.09G127000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
LOC_Os02g51400 No alias AAA family ATPase, putative, expressed 0.02 Orthogroups_2024-Update
MA_93384g0010 No alias (at4g02480 : 1067.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
Seita.4G096600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G223700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g030090 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030173 integral component of Golgi membrane IEP Predicted GO
CC GO:0031228 intrinsic component of Golgi membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 742 872
No external refs found!