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  5. HORVU6Hr1G027560.1

HORVU6Hr1G027560.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G027560.1
Cluster HCAA Clusters: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
79052 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
83339 No alias mitochondrial editing factor 22 0.05 Orthogroups_2024-Update
Bradi2g53450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G060536 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G103078 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G144843 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G165521 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G440349 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
Glyma.06G161900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G134700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G052060.4 No alias RNA editing factor *(MEF25) 0.05 Orthogroups_2024-Update
LOC_Os01g59890 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_94165g0010 No alias (at1g11290 : 612.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00003163-RA No alias (at3g23330 : 192.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00018595-RA No alias (at1g11290 : 678.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00050145-RA No alias (at4g13650 : 719.0) Pentatricopeptide repeat (PPR)... 0.01 Orthogroups_2024-Update
PSME_00054324-RA No alias (at3g24000 : 542.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
Potri.002G155100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G239600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.004G124400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.004G208000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G237000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Seita.2G047600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.2G293300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G250500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.01 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.02 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G240900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G292300.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G389200.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G237100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G239000.1 No alias RNA editing factor *(MEF1) 0.03 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G246800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.005G210700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G179000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.01 Orthogroups_2024-Update
Sobic.009G238700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G066900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g006800 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Solyc07g008480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Sopen07g026910 No alias PPR repeat family 0.01 Orthogroups_2024-Update
Sopen12g032510 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 380 427
IPR002885 Pentatricopeptide_repeat 204 252
IPR002885 Pentatricopeptide_repeat 314 360
IPR002885 Pentatricopeptide_repeat 581 629
IPR002885 Pentatricopeptide_repeat 480 528
IPR002885 Pentatricopeptide_repeat 103 150
IPR002885 Pentatricopeptide_repeat 288 310
IPR002885 Pentatricopeptide_repeat 75 102
IPR002885 Pentatricopeptide_repeat 179 201
IPR002885 Pentatricopeptide_repeat 656 682
No external refs found!