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  5. HORVU6Hr1G028690.3

HORVU6Hr1G028690.3


Description : organellar chaperone *(Clp-p/Clp-m)


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G028690.3
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
A4A49_26399 No alias chaperone protein clpb1 0.04 Orthogroups_2024-Update
At2g25140 No alias Chaperone protein ClpB4, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi2g49660 No alias heat shock protein 101 0.04 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Brara.G03189.1 No alias cytosolic chaperone *(Hsp101) 0.02 Orthogroups_2024-Update
Brara.I04445.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.02 Orthogroups_2024-Update
Cre11.g467575 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Cre12.g533351 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
GRMZM2G360681 No alias heat shock protein 101 0.05 Orthogroups_2024-Update
Glyma.04G062200 No alias casein lytic proteinase B4 0.06 Orthogroups_2024-Update
Glyma.05G022200 No alias heat shock protein 101 0.05 Orthogroups_2024-Update
Glyma.06G202200 No alias heat shock protein 101 0.07 Orthogroups_2024-Update
Kfl00027_0040 kfl00027_0040_v1.1 (q6f2y7|hs101_orysa : 1156.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
LOC_Os02g08490 No alias chaperone protein clpB 1, putative, expressed 0.04 Orthogroups_2024-Update
MA_596288g0010 No alias (at5g50920 : 437.0) Encodes a protein that is similar to... 0.03 Orthogroups_2024-Update
MA_8117g0010 No alias (at5g50920 : 620.0) Encodes a protein that is similar to... 0.04 Orthogroups_2024-Update
Mp1g16450.1 No alias cytosolic chaperone (Hsp101) 0.05 Orthogroups_2024-Update
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Orthogroups_2024-Update
PSME_00000131-RA No alias (at5g50920 : 1361.0) Encodes a protein that is similar... 0.02 Orthogroups_2024-Update
PSME_00000476-RA No alias (q6f2y7|hs101_orysa : 1375.0) Heat shock protein 101 -... 0.04 Orthogroups_2024-Update
PSME_00000477-RA No alias (q6f2y7|hs101_orysa : 1387.0) Heat shock protein 101 -... 0.05 Orthogroups_2024-Update
PSME_00004919-RA No alias (at2g25140 : 1357.0) Encodes ClpB4, which belongs to the... 0.07 Orthogroups_2024-Update
PSME_00005341-RA No alias (q6f2y7|hs101_orysa : 1383.0) Heat shock protein 101 -... 0.06 Orthogroups_2024-Update
PSME_00030571-RA No alias (q6f2y7|hs101_orysa : 608.0) Heat shock protein 101 -... 0.03 Orthogroups_2024-Update
Potri.015G056900 No alias heat shock protein 101 0.06 Orthogroups_2024-Update
Pp1s23_102V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Pp1s300_55V6 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Pp1s62_161V6 No alias chaperone clpb expressed 0.02 Orthogroups_2024-Update
Solyc03g115230 No alias Solanum lycopersicum heat shock protein 0.03 Orthogroups_2024-Update
Solyc03g118340 No alias Chloroplast ATP-dependent Clp protease chaperone protein... 0.03 Orthogroups_2024-Update
Solyc06g011380 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g011400 No alias No description available 0.02 Orthogroups_2024-Update
Sopen03g034270 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update
Sopen03g037240 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update
evm.model.contig_3516.2 No alias (at1g74310 : 794.0) Encodes ClpB1, which belongs to the... 0.05 Orthogroups_2024-Update
evm.model.contig_487.1 No alias (p35100|clpc_pea : 624.0) ATP-dependent Clp protease... 0.01 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR004176 Clp_N 112 163
IPR004176 Clp_N 190 240
IPR003959 ATPase_AAA_core 299 415
IPR003959 ATPase_AAA_core 695 864
IPR019489 Clp_ATPase_C 871 951
No external refs found!