HORVU6Hr1G031450.6

Description : SBP-type transcription factor

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G031450.6
Cluster	HCAA Clusters: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
Brara.G02852.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G160917	No alias	squamosa promoter binding protein-like 9	0.03	Orthogroups_2024-Update
GRMZM2G307588	No alias	squamosa promoter binding protein-like 9	0.02	Orthogroups_2024-Update
Glyma.03G143100	No alias	squamosa promoter binding protein-like 9	0.02	Orthogroups_2024-Update
Glyma.06G168600	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.04	Orthogroups_2024-Update
HORVU3Hr1G094730.2	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	58	131

External Links

No external refs found!