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  5. HORVU6Hr1G034680.3

HORVU6Hr1G034680.3


Description : component *(MBD9) of SWR1 chromatin remodeling complex


Gene families : OG_42_0005508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G034680.3
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Bradi3g06717 No alias methyl-CPG-binding domain 9 0.03 Orthogroups_2024-Update
MA_10435977g0020 No alias (at3g01460 : 239.0) Encodes a protein with a... 0.02 Orthogroups_2024-Update
Mp8g01420.1 No alias Methyl-CpG-binding domain-containing protein 9... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 1628 1722
IPR001487 Bromodomain 1147 1202
IPR019787 Znf_PHD-finger 1259 1305
IPR028942 WHIM1_dom 1370 1409
No external refs found!