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  5. HORVU6Hr1G034800.1

HORVU6Hr1G034800.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G034800.1
Cluster HCAA Clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
A4A49_41691 No alias e3 ubiquitin-protein ligase sdir1 0.03 Orthogroups_2024-Update
At3g30460 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Brara.C03342.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I05006.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G122848 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G157855 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
GRMZM2G168690 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G108300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os06g42700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g37230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10428335g0020 No alias (at3g19950 : 167.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9328282g0010 No alias (at5g01980 : 161.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G083001 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
Seita.7G317900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G163900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc08g075910 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen08g024560 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 287 328
No external refs found!