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  5. HORVU6Hr1G036840.2

HORVU6Hr1G036840.2


Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G036840.2
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
At5g21030 No alias PAZ domain-containing protein / piwi domain-containing... 0.03 Orthogroups_2024-Update
Bradi1g05162 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
Bradi1g36907 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
GRMZM2G079080 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
HORVU2Hr1G031130.2 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU3Hr1G021290.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G004010.8 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00003897-RA No alias (at5g43810 : 374.0) Encodes a member of the EIF2C... 0.02 Orthogroups_2024-Update
Potri.014G159400 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Seita.9G359200.1 No alias regulatory protein *(AGO7) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.07 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032474 Argonaute_N 111 246
IPR014811 ArgoL1 256 305
IPR032472 ArgoL2 448 492
IPR003165 Piwi 594 913
IPR032473 Argonaute_Mid_dom 503 580
IPR003100 PAZ_dom 330 436
No external refs found!