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  5. HORVU6Hr1G040220.1

HORVU6Hr1G040220.1


Description : Unknown function


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G040220.1
Cluster HCAA Clusters: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
A4A49_05017 No alias heterogeneous nuclear ribonucleoprotein 1 0.03 Orthogroups_2024-Update
MA_13606g0010 No alias (at3g07810 : 328.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
MA_95333g0010 No alias (at3g07810 : 315.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
PSME_00023415-RA No alias (at5g40490 : 216.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00045509-RA No alias (at3g07810 : 234.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00052866-RA No alias (at3g07810 : 196.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 2 38
No external refs found!